Entry - #615349 - EHLERS-DANLOS SYNDROME, SPONDYLODYSPLASTIC TYPE, 2; EDSSPD2 - OMIM

# 615349

EHLERS-DANLOS SYNDROME, SPONDYLODYSPLASTIC TYPE, 2; EDSSPD2


Alternative titles; symbols

EHLERS-DANLOS SYNDROME, PROGEROID TYPE, 2, FORMERLY; EDSP2, FORMERLY


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
1p36.33 Ehlers-Danlos syndrome, spondylodysplastic type, 2 615349 AR 3 B3GALT6 615291
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal recessive
GROWTH
Weight
- Low weight
HEAD & NECK
Face
- Prominent forehead
- Flat face
Eyes
- Prominent eyes
- Proptosis
- Blue sclerae
Mouth
- Long upper lip
- Cleft palate (rare)
CHEST
Ribs Sternum Clavicles & Scapulae
- Pectus excavatum (rare)
SKELETAL
- Large joint laxity
Spine
- Platyspondyly
- Kyphoscoliosis
- Anterior beak of vertebral body
Pelvis
- Short ilia
- Hip dislocation
- Prominent lesser trochanter
Limbs
- Restricted elbow movement
- Elbow malalignment
- Metaphyseal flaring
- Epiphyseal dysplasia of femoral head
Hands
- Spatulate finger
- Finger laxity
- Hand contracture (rare)
- Advanced carpal ossification
- Carpal fusion (rare)
- Metacarpal shortening
Feet
- Clubfeet
SKIN, NAILS, & HAIR
Skin
- Doughy skin
- Hyperextensible skin
- Cutis laxa
Hair
- Sparse hair
NEUROLOGIC
Central Nervous System
- Hypotonia
- Developmental delay (rare)
MOLECULAR BASIS
- Caused by mutation in the UDP-Gal:beta-Gal beta-1,3-galactosyltransferase polypeptide 6 gene (B3GALT6, 615291.0007)
Ehlers-Danlos syndrome - PS130000 - 22 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.33 Ehlers-Danlos syndrome, spondylodysplastic type, 2 AR 3 615349 B3GALT6 615291
1p36.22 Ehlers-Danlos syndrome, kyphoscoliotic type, 1 AR 3 225400 PLOD1 153454
2q32.2 Ehlers-Danlos syndrome, vascular type AD 3 130050 COL3A1 120180
2q32.2 Ehlers-Danlos syndrome, classic type, 2 AD 3 130010 COL5A2 120190
4q27 Brittle cornea syndrome 2 AR 3 614170 PRDM5 614161
5q35.3 Ehlers-Danlos syndrome, spondylodysplastic type, 1 AR 3 130070 B4GALT7 604327
5q35.3 Ehlers-Danlos syndrome, dermatosparaxis type AR 3 225410 ADAMTS2 604539
6p21.33-p21.32 Ehlers-Danlos syndrome, classic-like, 1 AR 3 606408 TNXB 600985
6q13-q14.1 Bethlem myopathy 2 AD 3 616471 COL12A1 120320
6q22.1 Ehlers-Danlos syndrome, musculocontractural type 2 AR 3 615539 DSE 605942
7p14.3 Ehlers-Danlos syndrome, kyphoscoliotic type, 2 AR 3 614557 FKBP14 614505
7p13 Ehlers-Danlos syndrome, classic-like, 2 AR 3 618000 AEBP1 602981
7q21.3 Ehlers-Danlos syndrome, arthrochalasia type, 2 AD 3 617821 COL1A2 120160
7q21.3 Ehlers-Danlos syndrome, cardiac valvular type AR 3 225320 COL1A2 120160
9q34.3 Ehlers-Danlos syndrome, classic type, 1 AD 3 130000 COL5A1 120215
11p11.2 Ehlers-Danlos syndrome, spondylodysplastic type, 3 AR 3 612350 SLC39A13 608735
12p13.31 Ehlers-Danlos syndrome, periodontal type, 2 AD 3 617174 C1S 120580
12p13.31 Ehlers-Danlos syndrome, periodontal type, 1 AD 3 130080 C1R 613785
15q15.1 Ehlers-Danlos syndrome, musculocontractural type 1 AR 3 601776 CHST14 608429
16q24.2 Brittle cornea syndrome 1 AR 3 229200 ZNF469 612078
17q21.33 Ehlers-Danlos syndrome, arthrochalasia type, 1 AD 3 130060 COL1A1 120150
Not Mapped Ehlers-Danlos syndrome, hypermobility type AD 130020 EDSHMB 130020

TEXT

A number sign (#) is used with this entry because of evidence that Ehlers-Danlos syndrome spondylodysplastic type 2 (EDSSPD2) is caused by compound heterozygous or homozygous mutation in the B3GALT6 gene (615291) on chromosome 1p36.

Mutation in the B3GALT6 gene can also cause spondyloepimetaphyseal dysplasia with joint laxity type 1 (SEMDJL1; 271640) and Al-Gazali syndrome (ALGAZ; 609465), which have overlapping features with EDSSPD2.


Description

The features of Ehlers-Danlos syndrome spondylodysplastic type 2 (EDSSPD2) include an aged appearance, developmental delay, short stature, craniofacial disproportion, generalized osteopenia, defective wound healing, hypermobile joints, hypotonic muscles, and loose but elastic skin (Okajima et al., 1999).

For a discussion of genetic heterogeneity of the spondylodysplastic type of Ehlers-Danlos syndrome, see 130070.


Clinical Features

Van Damme et al. (2018) reported clinical and molecular data on 12 patients with EDSSPD2, all of whom had findings of both a severe form of Ehler-Danlos syndrome and spondyloepimetaphyseal dysplasia. Prenatal ultrasound findings were described in 4 pregnancies and included features of severe skeletal dysplasia. Among the 10 liveborn patients, 5 were born at term; gestational age was not mentioned for the other patients. Anthropometric measurements were within normal limits at birth, but postnatal growth restriction was severe in all patients. Progressive and severe kyphoscoliosis, multiple joint contractures of small and large joints, and joint hypermobility with multiple dislocations of small and large joints were seen in all patients. Four patients had congenital hip dysplasia, and 3 had cervical spine instability. Hypotonia was reported in 5 patients. Skin was hyperextensible in 7 of 10 patients and soft with a doughy texture in 9 of 10 patients. Skin was described as thin and translucent in 4 patients, and as having a cutis laxa-like aspect in 5. Atrophic scarring was reported in 5 patients, but easy bruisability was described in only 2. Most patients had recognizable facies, including midfacial hypoplasia, frontal bossing, low-set and posteriorly rotated ears, depressed nasal bridge, prominent eyes, blue sclerae, short nose with anteverted nares, and a long philtrum. Delayed motor development ranging from mild to severe was reported in 5 patients, and speech was delayed in 2 patients. One patient had an intracranial hemorrhage following vaginal delivery and had a dilated aortic root and mild prolapse of the mitral valve. This patient also had recurrent spontaneous pneumothoraces. Another patient had perforated diverticulitis at age 33 years, a cerebral vascular accident at age 35 years, and dilatation of the thoracic aorta diagnosed at age 37 years. Radiographic findings included moderate to severe spondyloepimetaphyseal dysplasia. All patients showed widening of the metaphyses of long bones, relative narrowing and bowing of the diaphysis of long bones, hypoplasia of the iliac bones, and changes in the shape of the vertebral bodies. All but one patient had moderate to severe acetabular dysplasia and femoral head dysplasia. Osteopenia was seen in 8 patients.


Molecular Genetics

In 4 patients from 3 families with a progeroid form of EDS who did not have mutations in the B4GALT7 gene, Nakajima et al. (2013) performed Sanger sequencing of the B3GALT6 gene and found that all 4 patients were compound heterozygous for a frameshift and a missense mutation (615291.0007-615291.0011). Nakajima et al. (2013) showed that the GalT-II activities of a missense mutation that was common to 2 of the families (S309T; 615291.0008) were significantly decreased compared to wildtype, suggesting loss of function. The mutations were not detected in more than 200 ethnically matched controls or in public databases, including the 1000 Genomes Project Database.

Using whole-exome, panel, and direct gene sequencing of 12 patients from 9 families with EDSSPD2, Van Damme et al. (2018) identified 8 compound heterozygous mutations and 1 homozygous (615291.0015) mutation in the B3GALT6 gene, including 11 missense variants, 2 frameshift variants, a deletion of 19 amino acids, and a start codon alteration. Most mutations were located in the luminal domain. In families in whom parental DNA was available, mutations segregated as expected. Studies in fibroblasts showed that these mutations reduced the amount and activity of B3GALT6, which in turn reduced glycosaminoglycan synthesis and produced ultrastructural abnormalities in collagen fibril organization.


REFERENCES

  1. Nakajima, M., Mizumoto, S., Miyake, N., Kogawa, R., Iida, A., Ito, H., Kitoh, H., Hirayama, A., Mitsubuchi, H., Miyazaki, O., Kosaki, R., Horikawa, R., and 19 others. Mutations in B3GALT6, which encodes a glycosaminoglycan linker region enzyme, cause a spectrum of skeletal and connective tissue disorders. Am. J. Hum. Genet. 92: 927-934, 2013. [PubMed: 23664117, images, related citations] [Full Text]

  2. Okajima, T., Fukumoto, S., Furukawa, K., Urano, T., Furukawa, K. Molecular basis for the progeroid variant of Ehlers-Danlos syndrome: identification and characterization of two mutations in galactosyltransferase I gene. J. Biol. Chem. 274: 28841-28844, 1999. [PubMed: 10506123, related citations] [Full Text]

  3. Van Damme, T., Pang, X., Guillemyn, B., Gulberti, S., Syx, D., De Rycke, R., Kaye, O., de Die-Smulders, C. E. M., Pfundt, R., Kariminejad, A., Nampoothiri, S., and 10 others. Biallelic B3GALT6 mutations cause spondylodysplastic Ehlers-Danlos syndrome. Hum. Molec. Genet. 27: 3475-3487, 2018. [PubMed: 29931299, related citations] [Full Text]


Contributors:
Sonja A. Rasmussen - updated : 03/29/2019
Creation Date:
Nara Sobreira : 7/30/2013
carol : 04/28/2020
carol : 04/06/2020
carol : 04/02/2019
carol : 03/29/2019
carol : 12/19/2018
carol : 04/04/2018
carol : 12/22/2017
carol : 12/21/2017
carol : 09/08/2016
carol : 08/01/2013

# 615349

EHLERS-DANLOS SYNDROME, SPONDYLODYSPLASTIC TYPE, 2; EDSSPD2


Alternative titles; symbols

EHLERS-DANLOS SYNDROME, PROGEROID TYPE, 2, FORMERLY; EDSP2, FORMERLY


SNOMEDCT: 1251499005;   ORPHA: 536467, 536471;   DO: 0050802;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
1p36.33 Ehlers-Danlos syndrome, spondylodysplastic type, 2 615349 Autosomal recessive 3 B3GALT6 615291

TEXT

A number sign (#) is used with this entry because of evidence that Ehlers-Danlos syndrome spondylodysplastic type 2 (EDSSPD2) is caused by compound heterozygous or homozygous mutation in the B3GALT6 gene (615291) on chromosome 1p36.

Mutation in the B3GALT6 gene can also cause spondyloepimetaphyseal dysplasia with joint laxity type 1 (SEMDJL1; 271640) and Al-Gazali syndrome (ALGAZ; 609465), which have overlapping features with EDSSPD2.


Description

The features of Ehlers-Danlos syndrome spondylodysplastic type 2 (EDSSPD2) include an aged appearance, developmental delay, short stature, craniofacial disproportion, generalized osteopenia, defective wound healing, hypermobile joints, hypotonic muscles, and loose but elastic skin (Okajima et al., 1999).

For a discussion of genetic heterogeneity of the spondylodysplastic type of Ehlers-Danlos syndrome, see 130070.


Clinical Features

Van Damme et al. (2018) reported clinical and molecular data on 12 patients with EDSSPD2, all of whom had findings of both a severe form of Ehler-Danlos syndrome and spondyloepimetaphyseal dysplasia. Prenatal ultrasound findings were described in 4 pregnancies and included features of severe skeletal dysplasia. Among the 10 liveborn patients, 5 were born at term; gestational age was not mentioned for the other patients. Anthropometric measurements were within normal limits at birth, but postnatal growth restriction was severe in all patients. Progressive and severe kyphoscoliosis, multiple joint contractures of small and large joints, and joint hypermobility with multiple dislocations of small and large joints were seen in all patients. Four patients had congenital hip dysplasia, and 3 had cervical spine instability. Hypotonia was reported in 5 patients. Skin was hyperextensible in 7 of 10 patients and soft with a doughy texture in 9 of 10 patients. Skin was described as thin and translucent in 4 patients, and as having a cutis laxa-like aspect in 5. Atrophic scarring was reported in 5 patients, but easy bruisability was described in only 2. Most patients had recognizable facies, including midfacial hypoplasia, frontal bossing, low-set and posteriorly rotated ears, depressed nasal bridge, prominent eyes, blue sclerae, short nose with anteverted nares, and a long philtrum. Delayed motor development ranging from mild to severe was reported in 5 patients, and speech was delayed in 2 patients. One patient had an intracranial hemorrhage following vaginal delivery and had a dilated aortic root and mild prolapse of the mitral valve. This patient also had recurrent spontaneous pneumothoraces. Another patient had perforated diverticulitis at age 33 years, a cerebral vascular accident at age 35 years, and dilatation of the thoracic aorta diagnosed at age 37 years. Radiographic findings included moderate to severe spondyloepimetaphyseal dysplasia. All patients showed widening of the metaphyses of long bones, relative narrowing and bowing of the diaphysis of long bones, hypoplasia of the iliac bones, and changes in the shape of the vertebral bodies. All but one patient had moderate to severe acetabular dysplasia and femoral head dysplasia. Osteopenia was seen in 8 patients.


Molecular Genetics

In 4 patients from 3 families with a progeroid form of EDS who did not have mutations in the B4GALT7 gene, Nakajima et al. (2013) performed Sanger sequencing of the B3GALT6 gene and found that all 4 patients were compound heterozygous for a frameshift and a missense mutation (615291.0007-615291.0011). Nakajima et al. (2013) showed that the GalT-II activities of a missense mutation that was common to 2 of the families (S309T; 615291.0008) were significantly decreased compared to wildtype, suggesting loss of function. The mutations were not detected in more than 200 ethnically matched controls or in public databases, including the 1000 Genomes Project Database.

Using whole-exome, panel, and direct gene sequencing of 12 patients from 9 families with EDSSPD2, Van Damme et al. (2018) identified 8 compound heterozygous mutations and 1 homozygous (615291.0015) mutation in the B3GALT6 gene, including 11 missense variants, 2 frameshift variants, a deletion of 19 amino acids, and a start codon alteration. Most mutations were located in the luminal domain. In families in whom parental DNA was available, mutations segregated as expected. Studies in fibroblasts showed that these mutations reduced the amount and activity of B3GALT6, which in turn reduced glycosaminoglycan synthesis and produced ultrastructural abnormalities in collagen fibril organization.


REFERENCES

  1. Nakajima, M., Mizumoto, S., Miyake, N., Kogawa, R., Iida, A., Ito, H., Kitoh, H., Hirayama, A., Mitsubuchi, H., Miyazaki, O., Kosaki, R., Horikawa, R., and 19 others. Mutations in B3GALT6, which encodes a glycosaminoglycan linker region enzyme, cause a spectrum of skeletal and connective tissue disorders. Am. J. Hum. Genet. 92: 927-934, 2013. [PubMed: 23664117] [Full Text: https://doi.org/10.1016/j.ajhg.2013.04.003]

  2. Okajima, T., Fukumoto, S., Furukawa, K., Urano, T., Furukawa, K. Molecular basis for the progeroid variant of Ehlers-Danlos syndrome: identification and characterization of two mutations in galactosyltransferase I gene. J. Biol. Chem. 274: 28841-28844, 1999. [PubMed: 10506123] [Full Text: https://doi.org/10.1074/jbc.274.41.28841]

  3. Van Damme, T., Pang, X., Guillemyn, B., Gulberti, S., Syx, D., De Rycke, R., Kaye, O., de Die-Smulders, C. E. M., Pfundt, R., Kariminejad, A., Nampoothiri, S., and 10 others. Biallelic B3GALT6 mutations cause spondylodysplastic Ehlers-Danlos syndrome. Hum. Molec. Genet. 27: 3475-3487, 2018. [PubMed: 29931299] [Full Text: https://doi.org/10.1093/hmg/ddy234]


Contributors:
Sonja A. Rasmussen - updated : 03/29/2019

Creation Date:
Nara Sobreira : 7/30/2013

Edit History:
carol : 04/28/2020
carol : 04/06/2020
carol : 04/02/2019
carol : 03/29/2019
carol : 12/19/2018
carol : 04/04/2018
carol : 12/22/2017
carol : 12/21/2017
carol : 09/08/2016
carol : 08/01/2013